Turns out clearing those wine settings were not so easy. Granted, removing ~/.wine removes all installed windows applications but the menu entries and open with entries remain. I lceared them manually, by timestamp because I don't like the manual's guide in deleting everything under these directories:
rm -f ~/.config/menus/applications-merged/wine*
rm -rf ~/.local/share/applications/wine
rm -f ~/.local/share/desktop-directories/wine*
rm -f ~/.local/share/icons/????_*.{xpm,png}
rm -f ~/.local/share/icons/*-x-wine-*.{xpm,png} }}}
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